Abstract
At early drug discovery, purified protein-based assays are often used to characterise compound potency. As far as dose response is concerned, it is often thought that a time-independent inhibitor is reversible and a time-dependent inhibitor is irreversible. Using a simple kinetics model, we investigate the legitimacy of this. Our model-based analytical analysis and numerical studies reveal that dose response of an irreversible inhibitor may appear time-independent under certain parametric conditions. Hence, time-independence cannot be used as evidence for inhibitor reversibility. Furthermore, we also analysed how the synthesis and degradation of a target receptor affect drug inhibition in an in vitro cell-based assay setting. Indeed, these processes may also influence dose response of an irreversible inhibitor in such a way that it appears time-independent under certain conditions. Hence, time-independent dose response in a cell assay also needs careful considerations. It is necessary to formulate a suitable model for analysis of protein-based assay and in vitro cell assay data to ensure a consistent understanding.
Original language | English |
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Pages | 38-43 |
Number of pages | 6 |
DOIs | |
Publication status | Published - 2 Nov 2014 |
Event | IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 2014 - Hilton Hotel, Belfast, United Kingdom Duration: 2 Nov 2014 → 5 Nov 2014 http://scm.ulster.ac.uk/~bibm/2014/index.html |
Conference
Conference | IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 2014 |
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Abbreviated title | IEEE BIBM 2014 |
Country/Territory | United Kingdom |
City | Belfast |
Period | 2/11/14 → 5/11/14 |
Internet address |
Keywords
- receptor enzyme activity
- drug discovery
- time dependant dose response