Quantum-assisted biomolecular modelling

Sarah A. Harris, Vivien M. Kendon

Research output: Contribution to journalArticlepeer-review

17 Citations (Scopus)

Abstract

Our understanding of the physics of biological molecules, such as proteins and DNA, is limited because the approximations we usually apply to model inert materials are not, in general, applicable to soft, chemically inhomogeneous systems. The configurational complexity of biomolecules means the entropic contribution to the free energy is a significant factor in their behaviour, requiring detailed dynamical calculations to fully evaluate. Computer simulations capable of taking all interatomic interactions into account are therefore vital. However, even with the best current supercomputing facilities, we are unable to capture enough of the most interesting aspects of their behaviour to properly understand how they work. This limits our ability to design new molecules, to treat diseases, for example. Progress in biomolecular simulation depends crucially on increasing the computing power available. Faster classical computers are in the pipeline, but these provide only incremental improvements. Quantum computing offers the possibility of performing huge numbers of calculations in parallel, when it becomes available. We discuss the current open questions in biomolecular simulation, how these might be addressed using quantum computation and speculate on the future importance of quantum-assisted biomolecular modelling.
Original languageEnglish
Pages (from-to)3581-3592
Number of pages12
JournalPhilosophical Transactions A: Mathematical, Physical and Engineering Sciences
Volume368
Issue number1924
DOIs
Publication statusPublished - 13 Aug 2010

Keywords

  • biomolecular modelling
  • computational biophysics
  • quantum computation
  • biological materials
  • biomolecules
  • computational linguistics
  • quantum computers
  • quantum theory
  • bio-molecular
  • biological molecule
  • biomolecular Simulation
  • computing power
  • dynamical calculations
  • entropic contributions
  • incremental improvements
  • inert materials
  • inhomogeneous system
  • interatomic interactions
  • quantum Computing
  • significant factors
  • computer simulation
  • DNA
  • protein
  • biological model
  • chemical structure
  • chemistry
  • conformation
  • protein conformation
  • review
  • thermodynamics
  • models, Biological
  • models, Molecular
  • nucleic acid conformation
  • proteins

Fingerprint

Dive into the research topics of 'Quantum-assisted biomolecular modelling'. Together they form a unique fingerprint.

Cite this