Abstract
This paper proposes a flexible ant colony (FAC) algorithm for solving protein folding problems based on the hydrophobic-polar square lattice model. Collaborations of novel pheromone and heuristic strategies in the proposed algorithm make it more effective in predicting structures of proteins compared with other state-of-the-art algorithms.
| Original language | English |
|---|---|
| Pages (from-to) | 469-477 |
| Number of pages | 9 |
| Journal | Protein and Peptide Letters |
| Volume | 15 |
| Issue number | 5 |
| DOIs | |
| Publication status | Published - 1 Jun 2008 |
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Keywords
- ant colony optimization
- hydrophobic-polar (HP) model
- protein folding
- protein structure prediction
Cite this
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Protein folding in hydrophobic-polar lattice model : a flexible ant-colony optimization approach. / Hu, Xiao Min; Zhang, Jun; Xiao, Jing; Li, Yun.
In: Protein and Peptide Letters, Vol. 15, No. 5, 01.06.2008, p. 469-477.Research output: Contribution to journal › Article
TY - JOUR
T1 - Protein folding in hydrophobic-polar lattice model
T2 - a flexible ant-colony optimization approach
AU - Hu, Xiao Min
AU - Zhang, Jun
AU - Xiao, Jing
AU - Li, Yun
PY - 2008/6/1
Y1 - 2008/6/1
N2 - This paper proposes a flexible ant colony (FAC) algorithm for solving protein folding problems based on the hydrophobic-polar square lattice model. Collaborations of novel pheromone and heuristic strategies in the proposed algorithm make it more effective in predicting structures of proteins compared with other state-of-the-art algorithms.
AB - This paper proposes a flexible ant colony (FAC) algorithm for solving protein folding problems based on the hydrophobic-polar square lattice model. Collaborations of novel pheromone and heuristic strategies in the proposed algorithm make it more effective in predicting structures of proteins compared with other state-of-the-art algorithms.
KW - ant colony optimization
KW - hydrophobic-polar (HP) model
KW - protein folding
KW - protein structure prediction
UR - http://www.scopus.com/inward/record.url?scp=45749117897&partnerID=8YFLogxK
U2 - 10.2174/092986608784567465
DO - 10.2174/092986608784567465
M3 - Article
VL - 15
SP - 469
EP - 477
JO - Protein and Peptide Letters
JF - Protein and Peptide Letters
SN - 0929-8665
IS - 5
ER -