Mechanism of proton-coupled electron transfer described with QM/MM implementation of coupled-perturbed density-functional tight-binding

Denis Maag, Josua Böser, Henryk A. Witek, Ben Hourahine, Marcus Elstner, Tomáš Kubař

Research output: Contribution to journalArticlepeer-review

2 Citations (Scopus)
18 Downloads (Pure)

Abstract

Coupled-perturbed equations for degenerate orbitals were implemented for third order density-functional tight binding, which allowed the use of Mulliken charges as reaction coordinates. The method was applied to proton-coupled electron transfer (PCET) reactions in a model system and thoroughly tested for QM and QM/MM setups (i.e., coupled quantum and molecular mechanics). The performed enhanced sampling simulations were stable, and the obtained potentials of the mean force were able to address the thermodynamic and kinetic features of the reactions by showing the expected topography and energy barriers. Hence, this method has the potential to distinguish between concerted and sequential mechanisms and could next be applied to proton-coupled electron transfer reactions in more complex systems like proteins.

Original languageEnglish
Article number124107
Number of pages13
JournalJournal of Chemical Physics
Volume158
Issue number12
Early online date2 Mar 2023
DOIs
Publication statusPublished - 22 Mar 2023

Keywords

  • quantum and molecular mechanics
  • DFTB
  • DFTB+
  • tyrosine
  • gas phase and in solvent

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