Index-driven XML data integration to support functional genomics

Ela Hunt, Evangelos Pafilis, Inga Tulloch, John Wilson

Research output: Chapter in Book/Report/Conference proceedingChapter

52 Citations (Scopus)
12 Downloads (Pure)

Abstract

Identifies a new type of data integration problem that arises in functional genomics research in the context of large-scale experiments involving arrays, 2 dimensional protein gells and mass spectrometry.
Original languageEnglish
Title of host publicationProceedings of the International Workshop on Data Integration in Life Sciences, DILS'04
PublisherSpringer
Pages95-109
Number of pages14
Edition2994
DOIs
Publication statusPublished - 2002

Publication series

NameLecture Notes in Bioinformatics
PublisherSpringer

Keywords

  • mass spectrometry
  • genomics
  • arrays
  • xml
  • programming languages
  • data structures
  • data integration
  • XML
  • 2-dimensional protein gels
  • mass-spectrometry
  • relational tables
  • web queries
  • XML indexing
  • functional genomics

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