Index-driven XML data integration to support functional genomics

Ela Hunt, Evangelos Pafilis, Inga Tulloch, John Wilson

Research output: Chapter in Book/Report/Conference proceedingChapter

47 Citations (Scopus)
8 Downloads (Pure)

Abstract

Identifies a new type of data integration problem that arises in functional genomics research in the context of large-scale experiments involving arrays, 2 dimensional protein gells and mass spectrometry.
Original languageEnglish
Title of host publicationProceedings of the International Workshop on Data Integration in Life Sciences, DILS'04
PublisherSpringer
Pages95-109
Number of pages14
Edition2994
DOIs
Publication statusPublished - 2002

Publication series

NameLecture Notes in Bioinformatics
PublisherSpringer

Fingerprint

Data integration
XML
Mass spectrometry
Proteins
Experiments
Genomics

Keywords

  • mass spectrometry
  • genomics
  • arrays
  • xml
  • programming languages
  • data structures
  • data integration
  • XML
  • 2-dimensional protein gels
  • mass-spectrometry
  • relational tables
  • web queries
  • XML indexing
  • functional genomics

Cite this

Hunt, E., Pafilis, E., Tulloch, I., & Wilson, J. (2002). Index-driven XML data integration to support functional genomics. In Proceedings of the International Workshop on Data Integration in Life Sciences, DILS'04 (2994 ed., pp. 95-109). (Lecture Notes in Bioinformatics). Springer. https://doi.org/10.1007/b96666
Hunt, Ela ; Pafilis, Evangelos ; Tulloch, Inga ; Wilson, John. / Index-driven XML data integration to support functional genomics. Proceedings of the International Workshop on Data Integration in Life Sciences, DILS'04. 2994. ed. Springer, 2002. pp. 95-109 (Lecture Notes in Bioinformatics).
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Hunt, E, Pafilis, E, Tulloch, I & Wilson, J 2002, Index-driven XML data integration to support functional genomics. in Proceedings of the International Workshop on Data Integration in Life Sciences, DILS'04. 2994 edn, Lecture Notes in Bioinformatics, Springer, pp. 95-109. https://doi.org/10.1007/b96666

Index-driven XML data integration to support functional genomics. / Hunt, Ela; Pafilis, Evangelos; Tulloch, Inga; Wilson, John.

Proceedings of the International Workshop on Data Integration in Life Sciences, DILS'04. 2994. ed. Springer, 2002. p. 95-109 (Lecture Notes in Bioinformatics).

Research output: Chapter in Book/Report/Conference proceedingChapter

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KW - web queries

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Hunt E, Pafilis E, Tulloch I, Wilson J. Index-driven XML data integration to support functional genomics. In Proceedings of the International Workshop on Data Integration in Life Sciences, DILS'04. 2994 ed. Springer. 2002. p. 95-109. (Lecture Notes in Bioinformatics). https://doi.org/10.1007/b96666