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Abstract
Molecular simulations such as Monte Carlo, molecular dynamics, and metadynamics have been used to provide insight into crystallization phenomena, including nucleation and crystal growth. However, these simulations depend on the force field used, which models the atomic and molecular interactions, to adequately reproduce relevant material properties for the phases involved. Two widely used force fields, the General AMBER Force Field (GAFF) and the Optimized Potential for Liquid Simulations (OPLS), including several variants, have previously been used for studying urea crystallization. In this work, we investigated how well four different versions of the GAFF force field and five different versions of the OPLS force field reproduced known urea crystal and aqueous solution properties. Two force fields were found to have the best overall performance: a specific urea charge-optimized GAFF force field and the original all-atom OPLS force field. It is recommended that a suitable testing protocol involving both solution and solid properties, such as that used in this work, is adopted for the validation of force fields used for simulations of crystallization phenomena.
Original language | English |
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Pages (from-to) | 143–158 |
Number of pages | 16 |
Journal | Crystal Growth and Design |
Volume | 24 |
Issue number | 1 |
Early online date | 8 Dec 2023 |
DOIs | |
Publication status | Published - 3 Jan 2024 |
Funding
The authors thank EPSRC and the Future Manufacturing Research Hub in Continuous Manufacturing and Advanced Crystallization (Grant ref: EP/P006965/1) for funding this work. Results were obtained using the ARCHIE-WeSt High Performance Computer ( https://www.archie-west.ac.uk ) based at the University of Strathclyde. The authors thank EPSRC and the Future Manufacturing Research Hub in Continuous Manufacturing and Advanced Crystallization (Grant ref: EP/P006965/1) for funding this work. Results were obtained using the ARCHIE-WeSt High Performance Computer (https://www.archie-west.ac.uk) based at the University of Strathclyde.
Keywords
- molecular dynamics
- metadynamics
- crystallization
- urea crystal
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Dive into the research topics of 'Assessment of GAFF and OPLS force fields for urea: crystal and aqueous solution properties'. Together they form a unique fingerprint.Projects
- 1 Finished
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Doctoral Training Partnership 2020-2021 University of Strathclyde | Anker, Samira
Johnston, K. (Principal Investigator), Sefcik, J. (Co-investigator) & Anker, S. (Research Co-investigator)
EPSRC (Engineering and Physical Sciences Research Council)
1/10/20 → 14/01/25
Project: Research Studentship - Internally Allocated
Datasets
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Data for: "Assessment of GAFF and OPLS force fields for urea: crystal and aqueous solution properties"
Anker, S. (Creator), McKechnie, D. (Creator), Mulheran, P. (Creator), Sefcik, J. (Creator) & Johnston, K. (Creator), University of Strathclyde, 7 Dec 2023
DOI: 10.15129/580aa404-0d2d-448d-b728-4b33e33e0c1b
Dataset