Projects per year
Abstract
The pKa value of a molecule is of interest to chemists across a broad spectrum of fields including pharmacology, environmental chemistry and theoretical chemistry. Determination of pKa values can be accomplished through several experimental methods such as NMR techniques and titration together with computational techniques such as DFT calculations. However, all of these methods remain time consuming and computationally expensive. In this work we develop a method for the rapid calculation of pKa values of small molecules which utilises a combination of neural network potentials, low energy conformer searches and thermodynamic cycles. We show that neural network potentials trained on different phase and charge states can be employed in tandem to predict the full thermodynamic energy cycle of molecules. Focusing here on imidazolium derived carbene species, the method utilised can easily be extended to other functional groups of interest such as amines with further training.
Original language | English |
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Pages (from-to) | 23934-23943 |
Number of pages | 10 |
Journal | Physical Chemistry Chemical Physics |
Volume | 26 |
Issue number | 36 |
Early online date | 29 Aug 2024 |
DOIs | |
Publication status | E-pub ahead of print - 29 Aug 2024 |
Keywords
- pKa value
- neural network potential
- thermodynamic cycles
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Dive into the research topics of 'ANI neural network potentials for small molecule pKa prediction'. Together they form a unique fingerprint.Projects
- 1 Finished
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E Infrastructure Bid - Capital Equipment Bid
Littlejohn, D. (Principal Investigator), Fedorov, M. (Co-investigator), Mulheran, P. (Co-investigator) & Reese, J. (Co-investigator)
EPSRC (Engineering and Physical Sciences Research Council)
20/01/12 → 31/03/12
Project: Research
Datasets
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Data for: "ANI neural network potentials for small molecule pKa prediction"
Urquhart, R. (Creator), van Teijlingen, A. (Creator) & Tuttle, T. (Supervisor), University of Strathclyde, 2 Sept 2024
DOI: 10.15129/8e3a4b33-c787-43d6-afbb-0c1a9a975af8
Dataset