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Accelerating the density-functional tight-binding method using graphical processing units

Van-Quan Vuong, Caterina Cevallos, Ben Hourahine, Bálint Aradi, Jacek Jakowski, Stephan Irle, Cristopher Camacho

Research output: Contribution to journalArticlepeer-review

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Abstract

Acceleration of the density-functional tight-binding (DFTB) method on single and multiple graphical processing units (GPUs) was accomplished using the MAGMA linear algebra library. Two major computational bottlenecks of DFTB ground-state calculations were addressed in our implementation: the Hamiltonian matrix diagonalization and the density matrix construction. The code was implemented and benchmarked on two different computer systems: (1) the SUMMIT IBM Power9 supercomputer at the Oak Ridge National Laboratory Leadership Computing Facility (OLCF) with 1 to 6 NVIDIA Volta V100 GPUs per computer node, and (2) an in-house Intel Xeon computer with 1 to 2 NVIDIA Tesla P100 GPUs. The performance and parallel scalability were measured for three molecular models of 1-, 2- and 3-dimensional chemical systems, represented by carbon nanotubes, covalent organic frameworks, and water clusters.
Original languageEnglish
Article number084802
Number of pages23
JournalJournal of Chemical Physics
Volume158
Issue number8
Early online date6 Feb 2023
DOIs
Publication statusPublished - 28 Feb 2023

Keywords

  • physical and theoretical chemistry
  • general physics and astronomy
  • density-functional tight-binding
  • Hamiltonian matrix diagonalization
  • carbon nanotubes

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