Combatting antimicrobial resistance through new software for Natural Products Discovery (Tools and Resources Development Fund)

Research output

Research output per year 2019 2019 2021 2022 2022

• 5 Article

Research output per year

Research output per year

Search results

• 2022

  ActinoBase: tools and protocols for researchers working on Streptomyces and other filamentous actinobacteria

  Feeney, M. A., Newitt, J. T., Addington, E., Algora-Gallardo, L., Allan, C., Balis, L., Birke, A. S., Castaño-Espriu, L., Charkoudian, L. K., Devine, R., Gayrard, D., Hamilton, J., Hennrich, O., Hoskisson, P. A., Keith-Baker, M., Klein, J. G., Kruasuwan, W., Mark, D. R., Mast, Y., McHugh, R. E., & 24 othersMcLean, T. C., Mohit, E., Munnoch, J. T., Murray, J., Noble, K., Otani, H., Parra, J., Pereira, C. F., Perry, L., Pintor-Escobar, L., Pritchard, L., Prudence, S. M. M., Russell, A. H., Schniete, J. K., Seipke, R. F., Sélem-Mojica, N., Undabarrena, A., Vind, K., van Wezel, G. P., Wilkinson, B., Worsley, S. F., Duncan, K. R., Fernández-Martínez, L. T. & Hutchings, M. I., 1 Jul 2022, In: Microbial Genomics. 8, 7, 11 p., 000824.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Actinobacteria 100%
  • Streptomyces 96%
  • Research Personnel 54%
  • Bacteria 26%
  • Ecology 23%
  17 Downloads (Pure)
• 2021

  Ranking microbial metabolomic and genomic links in the NPLinker framework using complementary scoring functions

  Eldjárn, G. H., Ramsay, A., van der Hooft, J. J. J., Duncan, K. R., Soldatou, S., Rousu, J., Daly, R., Wandy, J. & Rogers, S., 4 May 2021, In: PLoS Computational Biology. 17, 5, 24 p., e1008920.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Metabolomics 100%
  • Metabolites 85%
  • Scoring 75%
  • Genomics 73%
  • metabolomics 64%
  12 Citations (Scopus)

  12 Downloads (Pure)

• Comparative metabologenomics analysis of polar actinomycetes

  Soldatou, S., Eldjárn, G. H., Ramsey, A., van der Hooft, J. J. J., Hughes, A. H., Rogers, S. & Duncan, K. R., 10 Feb 2021, In: Marine Drugs. 19, 2, 21 p., 103.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Actinobacteria 100%
  • Metabolomics 86%
  • ectoine 72%
  • Datasets 62%
  • Acinetobacter baumannii 47%
  11 Citations (Scopus)

  34 Downloads (Pure)
• 2019

  The Natural Products Atlas: an open access knowledge base for microbial natural products discovery

  van Santen, J. A., Jacob, G., Singh, A. L., Aniebok, V., Balunas, M. J., Bunsko, D., Carnevale Neto, F., Castanño-Espriu, L., Chang, C., Clark, T. N., Cleary Little, J. L., Delgadillo, D. A., Dorrestein, P. C., Duncan, K. R., Egan, J. M., Galey, M. M., Haeckl, F. P. J., Hua, A., Hughes, A. H., Iskakova, D., & 23 othersKhadilkar, A., Lee, J-H., Lee, S., LeGrow, N., Liu, D. Y., Macho, J. M., McCaughey, C. S., Medema, M. H., Neupane, R. P., O’Donnell, T. J., Paula, J. S., Sanchez, L. M., Shaikh, A. F., Soldatou, S., Terlouw, B. R., Tran, T. A., Valentine, M., van der Hooft, J. J. J., Vo, D. A., Wang, M., Wilson, D., Zink, K. E. & Linington, R. G., 27 Nov 2019, In: ACS Central Science. 5, 11, p. 1824-1833 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Open access 100%
  • Knowledge Bases 93%
  • Atlases 82%
  • Biological Products 75%
  • Occurrence in Nature 63%
  173 Citations (Scopus)

  51 Downloads (Pure)

• Linking biosynthetic and chemical space to accelerate microbial secondary metabolite discovery

  Soldatou, S., Eldjarn, G. H., Huerta-Uribe, A., Rogers, S. & Duncan, K., 1 Jul 2019, In: FEMS Microbiology Letters . 366, 13, 8 p., fnz142.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Multigene Family 100%
  • Datasets 72%
  • Synthetic Biology 63%
  • Metabolomics 50%
  • Genes 37%
  21 Citations (Scopus)

  22 Downloads (Pure)