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Research Output 2013 2019

2019

Awakening ancient polar actinobacteria: diversity, evolution and specialized metabolite potential

Millán-Aguiñaga, N., Soldatou, S., Brozio, S., Munnoch, J. T., Howe, J., Hoskisson, P. & Duncan, K., 7 Aug 2019, (Accepted/In press) In : Microbiology.

Research output: Contribution to journalArticle

Actinobacteria
Actinomycetales
Ecosystem
Nanopores
Bacteria

Linking biosynthetic and chemical space to accelerate microbial secondary metabolite discovery

Soldatou, S., Eldjarn, G. H., Huerta-Uribe, A., Rogers, S. & Duncan, K., 28 Jun 2019, In : FEMS Microbiology Letters . fnz142.

Research output: Contribution to journalArticle

Multigene Family
Synthetic Biology
Metabolomics
Genes
Language
2018
2 Citations (Scopus)

Temperature driven changes in benthic bacterial diversity influences biogeochemical cycling in coastal sediments

Hicks, N., Liu, X., Gregory, R., Kenny, J., Lucaci, A., Lenzi, L., Paterson, D. M. & Duncan, K. R., 22 Aug 2018, In : Frontiers in Microbiology. 9, 15 p., 1730.

Research output: Contribution to journalArticle

Open Access
File
Temperature
Ecosystem
Bacteroidetes
Geologic Sediments
Microalgae
2017
5 Citations (Scopus)

An integrative approach to decipher the chemical antagonism between the competing endophytes paraconiothyrium variabile and Bacillus subtilis

Vallet, M., Vanbellingen, Q. P., Fu, T., Le Caer, J-P., Della-Negra, S., Touboul, D., Duncan, K. R., Nay, B., Brunelle, A. & Prado, S., 15 Nov 2017, In : Journal of Natural Products. 80, 11, p. 2863–2873 11 p.

Research output: Contribution to journalArticle

Open Access
File
Endophytes
Bacilli
Bacillus subtilis
Fungi
Cephalotaxus
2016

Antarctic sponge associated microbial chemistry with biomedical relevance– the need for ecologically driven studies

Buchholz, H. H. & Duncan, K. R., 19 Aug 2016, (Accepted/In press) In : Current Organic Chemistry.

Research output: Contribution to journalArticle

Open Access
File
Porifera
Metabolites
Microorganisms
Biological Products
Microbial Consortia
13 Citations (Scopus)

Competitive strategies differentiate closely related species of marine actinobacteria

Patin, N. V., Duncan, K. R., Dorrestein, P. C. & Jensen, P. R., 29 Feb 2016, In : ISME Journal. 10, 2, p. 478-90 13 p.

Research output: Contribution to journalArticle

Actinobacteria
multigene family
secondary metabolites
bacteria
secondary metabolite
386 Citations (Scopus)

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

Wang, M., Carver, J. J., Phelan, V. V., Sanchez, L. M., Garg, N., Peng, Y., Nguyen, D. D., Watrous, J., Kapono, C. A., Luzzatto-Knaan, T., Porto, C., Bouslimani, A., Melnik, A. V., Meehan, M. J., Liu, W-T., Crüsemann, M., Boudreau, P. D., Esquenazi, E., Sandoval-Calderón, M., Kersten, R. D. & 107 othersPace, L. A., Quinn, R. A., Duncan, K. R., Hsu, C-C., Floros, D. J., Gavilan, R. G., Kleigrewe, K., Northen, T., Dutton, R. J., Parrot, D., Carlson, E. E., Aigle, B., Michelsen, C. F., Jelsbak, L., Sohlenkamp, C., Pevzner, P., Edlund, A., McLean, J., Piel, J., Murphy, B. T., Gerwick, L., Liaw, C-C., Yang, Y-L., Humpf, H-U., Maansson, M., Keyzers, R. A., Sims, A. C., Johnson, A. R., Sidebottom, A. M., Sedio, B. E., Klitgaard, A., Larson, C. B., Boya P, C. A., Torres-Mendoza, D., Gonzalez, D. J., Silva, D. B., Marques, L. M., Demarque, D. P., Pociute, E., O'Neill, E. C., Briand, E., Helfrich, E. J. N., Granatosky, E. A., Glukhov, E., Ryffel, F., Houson, H., Mohimani, H., Kharbush, J. J., Zeng, Y., Vorholt, J. A., Kurita, K. L., Charusanti, P., McPhail, K. L., Nielsen, K. F., Vuong, L., Elfeki, M., Traxler, M. F., Engene, N., Koyama, N., Vining, O. B., Baric, R., Silva, R. R., Mascuch, S. J., Tomasi, S., Jenkins, S., Macherla, V., Hoffman, T., Agarwal, V., Williams, P. G., Dai, J., Neupane, R., Gurr, J., Rodríguez, A. M. C., Lamsa, A., Zhang, C., Dorrestein, K., Duggan, B. M., Almaliti, J., Allard, P-M., Phapale, P., Nothias, L-F., Alexandrov, T., Litaudon, M., Wolfender, J-L., Kyle, J. E., Metz, T. O., Peryea, T., Nguyen, D-T., VanLeer, D., Shinn, P., Jadhav, A., Müller, R., Waters, K. M., Shi, W., Liu, X., Zhang, L., Knight, R., Jensen, P. R., Palsson, B. Ø., Pogliano, K., Linington, R. G., Gutiérrez, M., Lopes, N. P., Gerwick, W. H., Moore, B. S., Dorrestein, P. C. & Bandeira, N., 9 Aug 2016, In : Nature Biotechnology. 34, 8, p. 828-37 10 p.

Research output: Contribution to journalArticle

Open Access
File
Social Networking
Biological Products
Mass spectrometry
Mass Spectrometry
Biotechnology
13 Citations (Scopus)

Using molecular networking for microbial secondary metabolite bioprospecting

Purves, K., Macintyre, L., Brennan, D., Hreggviðsson, G. Ó., Kuttner, E., Ásgeirsdóttir, M. E., Young, L. C., Green, D. H., Edrada-Ebel, R. & Duncan, K., 8 Jan 2016, In : Metabolites. 6, 1, 18 p., 2.

Research output: Contribution to journalArticle

Open Access
File
Metabolites
Bacteria
Fermentation
Ions
Actinomyces
2015
19 Citations (Scopus)

Exploring the diversity and metabolic potential of actinomycetes from temperate marine sediments from Newfoundland, Canada.

Duncan, K. R., Haltli, B., Gill, K. A., Correa, H., Berrué, F. & Kerr, R. G., 31 Jan 2015, In : Journal of Industrial Microbiology & Biotechnology. 42, 1, p. 57-72 16 p.

Research output: Contribution to journalArticle

Geologic Sediments
Newfoundland and Labrador
Actinobacteria
Canada
Metabolomics
71 Citations (Scopus)

Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species

Duncan, K. R., Crüsemann, M., Lechner, A., Sarkar, A., Li, J., Ziemert, N., Wang, M., Bandeira, N., Moore, B. S., Dorrestein, P. C. & Jensen, P. R., 23 Apr 2015, In : Chemistry and Biology. 22, 4, p. 460-471 12 p.

Research output: Contribution to journalArticle

Multigene Family
Genes
Genome
Depsipeptides
Metabolites
2014
21 Citations (Scopus)

Bioprospecting from marine sediments of New Brunswick, Canada: exploring the relationship between total bacterial diversity and actinobacteria diversity

Duncan, K., Haltli, B., Gill, K. A. & Kerr, R. G., 13 Feb 2014, In : Marine Drugs. 12, 2, p. 899-925 27 p.

Research output: Contribution to journalArticle

Open Access
File
New Brunswick
Geologic Sediments
Actinobacteria
Canada
Streptomyces
2013
23 Citations (Scopus)

Antagonistic interactions mediated by marine bacteria: the role of small molecules

Wietz, M., Duncan, K., Patin, N. V. & Jensen, P. R., 14 Jul 2013, In : Journal of chemical ecology. 39, 7, p. 879-891 13 p.

Research output: Contribution to journalArticle

antibiosis
secondary metabolite
Metabolites
secondary metabolites
Bacteria
30 Citations (Scopus)

Chemical dereplication of marine actinomycetes by liquid chromatography-high resolution mass spectrometry profiling and statistical analysis

Forner, D., Berrué, F., Correa, H., Duncan, K. & Kerr, R. G., 17 Dec 2013, In : Analytica Chimica Acta. 805, p. 70-79 10 p.

Research output: Contribution to journalArticle

Actinobacteria
Liquid chromatography
Metabolites
Liquid Chromatography
Mass spectrometry