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Research Output 2002 2019

  • 26 Article
  • 3 Conference contribution book
  • 1 Chapter
  • 1 Meeting abstract
2019

Inhibition of the ULK1 protein complex suppresses Staphylococcus-induced autophagy and cell death

Radhi, O. A., Davidson, S., Scott, F., Zeng, R. X., Jones, D. H., Tomkinson, N. C. O., Yu, J. & Chan, E. Y. W., 6 Aug 2019, In : Journal of Biological Chemistry. 294, 19 p.

Research output: Contribution to journalArticle

Open Access
File
Salmonella
Autophagy
Cell death
Staphylococcus
Cell Death
2018
5 Citations (Scopus)

Geraniol as a novel antivirulence agent against bacillary dysentery-causing Shigella sonnei

Mirza, Z. R. M. H., Hasan, T., Seidel, V. & Yu, J., 1 Mar 2018, In : Virulence. 9, 1, p. 450-455 12 p.

Research output: Contribution to journalArticle

Open Access
File
Shigella sonnei
Bacillary Dysentery
Shigella
Shigella Vaccines
Cymbopogon
5 Citations (Scopus)

Human enteric a-defensin 5 promotes shigella infection by enhancing bacterial adhesion and invasion

Xu, D., Liao, C., Zhang, B., Tolbert, W. D., He, W., Dai, Z., Zhang, W., Yuan, W., Pazgier, M., Liu, J., Yu, J., Sansonetti, P. J., Bevins, C. L., Shao, Y. & Lu, W., 19 Jun 2018, In : Immunity. 48, 6, p. 1233-1244 12 p.

Research output: Contribution to journalArticle

Open Access
File
Bacterial Adhesion
Defensins
Shigella
Infection
Intestinal Mucosa
2017

A surface plasmon enhanced FLIM-FRET imaging approach based on Au nanoparticles

Zhang, Y., Chen, Y., Yu, J. & Birch, D. JS., 29 May 2017, In : Medical Devices and Diagnostic Engineering. 2, 1, p. 78-82 5 p.

Research output: Contribution to journalArticle

Open Access
File
energy transfer
microscopy
life (durability)
fluorescence
nanoparticles
2016
8 Citations (Scopus)

Hairpin DNA functionalized gold nanorods for mRNA detection in homogenous solution

Wei, G., Yu, J., Wang, J., Gu, P., Birch, D. J. S. & Chen, Y., 8 Sep 2016, In : Journal of Biomedical Optics. 21, 9, 31 p., 097001.

Research output: Contribution to journalArticle

Open Access
File
Nanoprobes
Nanorods
Gold
nanorods
DNA

The Shigella ProU system is required for osmotic tolerance and virulence: Shigella ProU in osmotic tolerance and virulence

Mahmoud, R. Y., Li, W., Eldomany, R. A., Emara, M. & Yu, J., 18 Aug 2016, (Accepted/In press) In : Virulence. p. 1-27 27 p., 2016VIRULENCE0129R.

Research output: Contribution to journalArticle

Open Access
File
Shigella sonnei
Shigella
Virulence
Moths
RNA Interference
2015
7 Citations (Scopus)

Evaluation of spa-typing of methicillin-resistant Staphylococcus aureus using high-resolution melting analysis

Mazi, W., Sangal, V., Sandstom, G., Saeed, A. & Yu, J., 2015, In : International Journal of Infectious Diseases. p. 1-18 18 p., S1201-9712(15)00109-5.

Research output: Contribution to journalArticle

Open Access
File
Methicillin-Resistant Staphylococcus aureus
Freezing
Temperature
Costs and Cost Analysis
Sudan
6 Citations (Scopus)

Rapid genotyping of Shigella sonnei using multiplex high resolution melting

Mazi, W., Sangal, V., Saeed, A., Sandstom, G., Weill, F-X. & Yu, J., 29 Apr 2015, In : Journal of Clinical Microbiology. 53, 7, p. 1-2 2 p., JCM.00874-15.

Research output: Contribution to journalArticle

Shigella sonnei
Bacillary Dysentery
Pandemics
Freezing
Single Nucleotide Polymorphism
3 Citations (Scopus)

Revealing the photophysics of gold-nanobeacons via time-resolved fluorescence spectroscopy

Wei, G., Simionesie, D., Sefcik, J., Sutter, J. U., Xue, Q., Yu, J., Wang, J., Birch, D. J. S. & Chen, Y., 9 Dec 2015, In : Optics Letters. 40, 24, p. 5738–5741 4 p.

Research output: Contribution to journalArticle

Open Access
File
Fluorescence Spectrometry
Gold
gold
fluorescence
spectroscopy
18 Citations (Scopus)
Open Access
File
Fluorophores
Nanorods
Gold
Energy transfer
nanorods
13 Citations (Scopus)

The multivalent adhesion molecule SSO1327 plays a key role in Shigella sonnei pathogenesis: SSO1327 is an adhesin required for S. sonnei pathogenesis

Mahmoud, R. Y., Stones, D. H., Li, W., Emara, M., Eldomany, R. A., Wang, D., Wang, Y., Krachler, A. M. & Yu, J., 21 Oct 2015, In : Molecular Microbiology. 43 p.

Research output: Contribution to journalArticle

Open Access
File
Shigella sonnei
Deoxycholic Acid
Epithelial Cells
Macrophages
Bacillary Dysentery
2014
5 Citations (Scopus)

Fusion of HPV L1 into Shigella surface IcsA: a new approach in developing live attenuated Shigella-HPV vaccine

Xu, D., Wang, D., Yang, X., Cao, M., Yu, J. & Yili, W., Feb 2014, In : Antiviral Research. 102, p. 61-69 9 p.

Research output: Contribution to journalArticle

Shigella sonnei
Papillomavirus Vaccines
Shigella
Uterine Cervical Neoplasms
Virion
2 Citations (Scopus)

Surface display of the HPV L1 capsid protein by the autotransporter Shigella IcsA

Xu, D., Yang, X., Wang, D., Yu, J. & Yili, W., 1 Jan 2014, In : Journal of Microbiology. 52, 1, p. 77-82 6 p.

Research output: Contribution to journalArticle

Shigella
Capsid Proteins
Shigella sonnei
Escherichia coli
Proteins
2013
14 Citations (Scopus)

Global phylogeny of Shigella sonnei from limited single nucleotide polymorphisms and development of a rapid and cost-effective SNP-typing scheme for strain identification by high resolution melting: rapid SNP-typing S. sonnei

Sangal, V., Holt, K. E., Yuan, J., Brown, D. J., Filliol-Toutain, I., Weill, F-X., Kim, D. W., da Silveira, W. D., Pickard, D., Thomson, N. R., Parkhill, J. & Yu, J., 1 Jan 2013, In : Journal of Clinical Microbiology.

Research output: Contribution to journalArticle

Shigella sonnei
Phylogeny
Freezing
Single Nucleotide Polymorphism
Costs and Cost Analysis
2012
54 Citations (Scopus)

Effect of size, shape, and surface modification on cytotoxicity of gold nanoparticles to human Hep-2 and canine MDCK cells

Zhang, Y., Xu, D., Li, W., Yu, J. & Chen, Y., 23 Apr 2012, In : Journal of Nanomaterials. 2012, 7 p., 375496.

Research output: Contribution to journalArticle

Open Access
File
Cytotoxicity
Gold
Surface treatment
Nanorods
Nanoparticles

Identification of complex biological network classes using extended correlation analysis

Lee, D., Yue, H., Yu, J. & Marshall, S., 2012, Advanced control of chemical processes. Kariwala, V., Samavedham, L. & Braatz, R. D. (eds.). New York, Vol. 8. p. 457-462 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution book

File
reaction rate
sensitivity analysis
viability
kinetics
modeling
15 Citations (Scopus)

Impacts of a long-term programme of active surveillance and chlorhexidine baths on the clinical and molecular epidemiology of meticillin-resistant Staphylococcus aureus (MRSA) in an Intensive Care Unit in Scotland

Sangal, V., Girvan, E. K., Jadhav, S., Lawes, T., Robb, A., Vali, L., Edwards, G. F., Yu, J. & Gould, I. M., Oct 2012, In : International Journal of Antimicrobial Agents. 40, 4, p. 323–331 9 p.

Research output: Contribution to journalArticle

Methicillin
Chlorhexidine
Molecular Epidemiology
Scotland
Baths
130 Citations (Scopus)

Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe

Holt, K., Baker, S., Weill, F-X., Holmes, E. C., Kitchen, A., Yu, J., Sangal, V., Brown, D. J., Coia, J. E., Kim, D. W., Choi, S. Y., Kim, S. H., da Silveira, W. D., Pickard, D. J., Farrar, J. J., Parkhill, J., Dougan, G. & Thomson, N. R., Sep 2012, In : Nature Genetics. 44, 9, p. 1056–1059 4 p.

Research output: Contribution to journalArticle

Open Access
File
Shigella sonnei
Genome
Dysentery
Shigella
Economic Development
2011
7 Citations (Scopus)

Gold nanorods for applications in biological imaging

Zhang, Y., Yu, J., Birch, D. J. S. & Chen, Y., 2011, Reporters, markers, dyes, nanoparticles and molecular probes for biomedical applications III. Achilefu, S. & Raghavachari, R. (eds.). Bellingham, (Proceedings of SPIE; vol. 7910).

Research output: Chapter in Book/Report/Conference proceedingConference contribution book

nanorods
gold
luminescence
life (durability)
photons
4 Citations (Scopus)

Mannosidase 2, alpha 1 deficiency is associated with ricin resistance in embryonic stem (ES) cells

Wang, W., Hale, C., Goulding, D., Haslam, S., Tissot, B., Lindsay, C., Michell, S., Titball, R., Yu, J., Toribio, A. L., Rossi, R., Dell, A., Bradley, A. & Dougan, G., 23 Aug 2011, In : PLoS One. 6, 8, 13 p., e22993.

Research output: Contribution to journalArticle

Open Access
File
Mannosidases
mannosidases
ricin
Ricin
embryonic stem cells

Molecular characterization of methicillin-resistant staphylococcus aureus from intensive care unit in Aberdeen Royal Infirmary, Scotland: lesson in microbiology & infection control

Sangal, V., Girvan, K., Jadhav, S., Vali, L., Edwards, G. F. S., Yu, J. & Gould, I. M., Dec 2011, In : Journal of Infection. 63, 6, p. E38-E39 2 p.

Research output: Contribution to journalMeeting abstract

Scotland
Methicillin-Resistant Staphylococcus aureus
Infection Control
Microbiology
Intensive Care Units
1 Citation (Scopus)

Natural products modulate Shigella–host-cell interaction

Xu, D., Saeed, A., Wang, Y., Seidel, V., Sandstrome, G. & Yu, J., Nov 2011, In : Journal of Medical Microbiology. 60, 11, p. 1626-1632 7 p.

Research output: Contribution to journalArticle

Shigella
Biological Products
Cell Communication
Shigella sonnei
U937 Cells
2010
54 Citations (Scopus)

Gold nanorods for fluorescence lifetime imaging in biology

Zhang, Y., Yu, J., Birch, D. & Chen, Y., 2 Apr 2010, In : Journal of Biomedical Optics. 15, 2, 3 p., 20504.

Research output: Contribution to journalArticle

Nanorods
biology
Gold
nanorods
Fluorescence

Shigella genomes: a tale of convergent evolution and specialization through IS-expansion and genome reduction

Yang, J., Sangal, V., Jin, Q., Yu, J., Fratamico, P. (ed.), Liu, Y. (ed.) & Kathariou, S. (ed.), Nov 2010, Genomes of Foodborne and Waterborne Pathogens. 420 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Shigella
convergent evolution
genome
pathogens
food safety
2009
21 Citations (Scopus)

Interaction of enteric bacterial pathogens with murine embryonic stem cells

Yu, J., Rossi, R., Hale, C., Goulding, D. & Dougan, G., Feb 2009, In : Infection and Immunity. 77, 2, p. 585-597 13 p.

Research output: Contribution to journalArticle

Embryonic Stem Cells
Shigella flexneri
Salmonella enterica
Shigella
Host-Pathogen Interactions

Methods for nanoparticle labeling of ricin and effect on toxicity

Wark, A., Yu, J., Lindsay, C. D., Nativo, P. & Graham, D., Sep 2009, Methods for nanoparticle labeling of ricin and effect on toxicity. Vol. 7486.

Research output: Chapter in Book/Report/Conference proceedingConference contribution book

File
Ricin
Labeling
Toxicity
Nanoparticles
Bioterrorism
7 Citations (Scopus)

The prevalence of human papillomavirus type 58 in chinese patients with cervical carcinoma and its influence on survival

Shah, W., Hongwei, C., Jin, Z., Lifang, D., Jun, Y. & Yili, W., 2009, In : Clinical Oncology. 21, 10, p. 768-774 6 p.

Research output: Contribution to journalArticle

Carcinoma
Survival
Human papillomavirus 16
Confidence Intervals
Papillomavirus Infections
2007
106 Citations (Scopus)

VFDB 2008 release: an enhanced web-based resource for comparative pathogenomics

Yang, J., Chen, L., Sun, L., Jin, Q. & Yu, J., 4 Nov 2007, In : Nucleic Acids Research. 36, p. D539-D542

Research output: Contribution to journalArticle

Virulence Factors
Databases
Virulence
Genome
Bacterial Genomes
2006
58 Citations (Scopus)

Revisiting the molecular evolutionary history of shigella spp

Yang, J., Nie, H., Chen, L., Zhang, X., Yang, F., Xu, X., Zhu, Y., Yu, J. & Qi, J., 2006, In : Journal of Molecular Evolution. 64, p. 71-79 9 p.

Research output: Contribution to journalArticle

Shigella
plasmid
virulence
History
enteroinvasive Escherichia coli
2005
134 Citations (Scopus)

Transcriptional adaptation of shigella flexneri during infection of macrophages and epithelial cells: insights into the strategies of a cytosolic bacterial pathogen

Lucchini, S., Liu, H., Qi, J., Hinton, J. C. D. & Yu, J., Jan 2005, In : Infection and Immunity. 73, 1, p. 88-102 15 p.

Research output: Contribution to journalArticle

Open Access
File
Shigella flexneri
U937 Cells
Epithelial Cells
Macrophages
Infection
2002
333 Citations (Scopus)

Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coliK12 and O157

Qi, J., Xu, J., Hou, Y. & Yu, J., 2002, In : Nucleic Acids Research. 30, 20, p. 4432-41 4391 p.

Research output: Contribution to journalArticle

Bacillary Dysentery
Shigella flexneri
Escherichia
Virulence
Chromosomes