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Research Output 1995 2019

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2019

Remote sensing of zooplankton swarms

Basedow, S. L., McKee, D., Lefering, I., Gislason, A., Daase, M., Trudnowska, E., Egeland, E. S., Choquet, M. & Falk-Petersen, S., 24 Jan 2019, In : Scientific Reports. 9, 1, 10 p., 686.

Research output: Contribution to journalArticle

Open Access
File
zooplankton
remote sensing
ocean color
temporal distribution
carbon sequestration
2018

Estimation of suspended matter, organic carbon and chlorophyll-A concentrations estimation from particle size and refractive index distributions

Agagliate, J., Röttgers, R., Heymann, K. & McKee, D., 19 Dec 2018, In : Applied Sciences. 8, 12, 19 p., 2676.

Research output: Contribution to journalArticle

Open Access
File
Chlorophyll a
chlorophylls
Chlorophyll
Organic carbon
Particle Size
3 Citations (Scopus)

Evaluation of a flow cytometry method to determine size and real refractive index distributions in natural marine particle populations

Agagliate, J., Röttgers, R., Twardowski, M. S. & McKee, D., 1 Mar 2018, In : Applied Optics. 57, 7, p. 1705-1716 12 p.

Research output: Contribution to journalArticle

Open Access
File
cytometry
Flow cytometry
Particle size analysis
Refractive index
particle size distribution
1 Citation (Scopus)

Forward modeling of inherent optical properties from flow cytometry estimates of particle size and refractive index

Agagliate, J., Lefering, I. & McKee, D., 10 Mar 2018, In : Applied Optics. 57, 8, p. 1777-1788 12 p.

Research output: Contribution to journalArticle

Open Access
File
cytometry
refractivity
particle size distribution
optical properties
root-mean-square errors
1 Citation (Scopus)

Inversion of in situ light absorption and attenuation measurements to estimate constituent concentrations in optically complex shelf seas

Ramírez-Pérez, M., Twardowski, M., Trees, C., Piera, J. & McKee, D., 31 Jan 2018, In : Journal of Geophysical Research: Oceans. 123, 1, p. 720-737 18 p.

Research output: Contribution to journalArticle

Open Access
File
shelf sea
electromagnetic absorption
shelves
Light absorption
Optical properties

Measurement uncertainties in PSICAM and reflective tube absorption meters

Lefering, I., Röttgers, R., Utschig, C., Twardowski, M. S. & McKee, D., 17 Sep 2018, In : Optics Express. 26, 19, p. 24384-24402 19 p.

Research output: Contribution to journalArticle

Open Access
File
point sources
alternating current
tubes
cavities
coastal water
2017
11 Citations (Scopus)

Assessing uncertainties in scattering correction algorithms for reflective tube absorption measurements made with a WET Labs ac-9

Stockley, N. D., Röttgers, R., McKee, D., Lefering, I., Sullivan, J. M. & Twardowski, M. S., 10 Nov 2017, In : Optics Express. 25, 24, p. A1139-A1153 15 p.

Research output: Contribution to journalArticle

Open Access
File
scattering functions
tubes
scattering
subtraction
water
4 Citations (Scopus)

Determination of the absorption coefficient of chromophoric dissolved organic matter from underway spectrophotometry

Dall'Olmo, G., Brewin, R. J. W., Nencioli, F., Organelli, E., Lefering, I., McKee, D., Röttgers, R., Mitchell, C., Boss, E., Bricaud, A. & Tilstone, G., 31 Oct 2017, In : Optics Express. 25, 24, p. A1079-A1095 17 p.

Research output: Contribution to journalArticle

Open Access
File
dissolved organic matter
spectrophotometry
absorptivity
oceans
color
3 Citations (Scopus)

Large scale three-dimensional modelling for wave and tidal energy resource and environmental impact: methodologies for quantifying acceptable thresholds for sustainable exploitation

Gallego, A., Side, J., Baston, S., Waldman, S., Bell, M., James, M., Davies, I., O'Hara Murray, R., Heath, M., Sabatino, A., McKee, D., McCaig, C., Karunarathna, H., Fairley, I., Chatzirodou, A., Venugopal, V., Nemalidinne, R., Yung, T. Z., Vögler, A., MacIver, R. & 1 othersBurrows, M., 1 Oct 2017, In : Ocean and Coastal Management. 147, p. 67-77 11 p.

Research output: Contribution to journalArticle

Open Access
File
energy resources
three-dimensional modeling
Environmental impact assessments
Energy resources
energy resource
7 Citations (Scopus)

The area-to-mass ratio and fractal dimension of marine flocs

Bowers, D. G., McKee, D., Jago, C. F. & Nimmo-Smith, W. A. M., 5 Apr 2017, In : Estuarine, Coastal and Shelf Science. 189, p. 224-234 11 p.

Research output: Contribution to journalArticle

Open Access
File
fractal dimensions
optical equipment
optical instrument
flocculation
reflectance
7 Citations (Scopus)

Uncertainty budgets for liquid waveguide CDOM absorption measurements

Lefering, I., Röttgers, R., Utschig, C. & McKee, D., 1 Aug 2017, In : Applied Optics. 56, 22, p. 6357-6366 10 p.

Research output: Contribution to journalArticle

Open Access
File
dissolved organic matter
budgets
Biological materials
Waveguides
waveguides
2016
2 Citations (Scopus)

A bio-optical model for integration into ecosystem models for the Ligurian Sea

Bengil, F., McKee, D., Beşiktepe, S. T., Sanjuan Calzado, V. & Trees, C., 31 Dec 2016, In : Progress in Oceanography. 149, p. 1-15 15 p.

Research output: Contribution to journalArticle

Open Access
File
ecosystems
ecosystem
radiative transfer
coastal water
prediction
18 Citations (Scopus)

A compilation of global bio-optical in situ data for ocean-colour satellite applications

Valente, A., Sathyendranath, S., Brotas, V., Groom, S., Grant, M., Taberner, M., Antoine, D., Arnone, R., Balch, W. M., Barker, K., Barlow, R., Belanger, S., Berthon, J. F., Besiktepe, S., Brando, V., Canuti, E., Chavez, F., Claustre, H., Crout, R., Frouin, R. & 23 othersGarcia-Soto, C., Gibb, S. W., Gould, R., Hooker, S., Kahru, M., Klein, H., Kratzer, S., Loisel, H., McKee, D., Mitchell, B. G., Moisan, T., Muller-Karger, F., O'Dowd, L., Ondrusek, M., Poulton, A. J., Repecaud, M., Smyth, T., Sosik, H. M., Twardowski, M., Voss, K., Werdell, J., Wernand, M. & Zibordi, G., 3 Jun 2016, In : Earth System Science Data. 8, 1, p. 235-252 18 p.

Research output: Contribution to journalArticle

Open Access
File
ocean color
metadata
quality control
in situ
optical property
4 Citations (Scopus)
Open Access
File
ocean color
optical properties
irradiance
optical property
Minerals
4 Citations (Scopus)

Improved determination of particulate absorption from combined filter pad and PSICAM measurements

Lefering, I., Röttgers, R., Weeks, R., Connor, D., Utschig, C., Heymann, K. & McKee, D., 17 Oct 2016, In : Optics Express. 24, 22, p. 24805-24823 19 p.

Research output: Contribution to journalArticle

Open Access
File
particulates
point sources
filters
cavities
regression analysis
9 Citations (Scopus)

Optical closure in marine waters from in situ inherent optical property measurements

Lefering, K., Bengil, F., Trees, C., Röttgers, R., Bowers, D., Nimmo-Smith, A., Schwarz, J. & McKee, D., 27 Jun 2016, In : Optics Express. 24, 13, p. 14036-14052 17 p.

Research output: Contribution to journalArticle

Open Access
File
closures
optical properties
water
stations
coastal water
2015
15 Citations (Scopus)

Impact of measurement uncertainties on determination of chlorophyll-specific absorption coefficient for marine phytoplankton

McKee, D., Röttgers, R., Neukermans, G., Calzado, V. S., Trees, C., Ampolo-Rella, M., Neil, C. & Cunningham, A., 2015, In : Journal of Geophysical Research: Oceans. 13 p.

Research output: Contribution to journalArticle

Open Access
File
phytoplankton
Phytoplankton
absorption coefficient
chlorophylls
Chlorophyll
4 Citations (Scopus)

Inferring inherent optical properties and water constituent profiles from apparent optical properties

Fan, Y., Li, W., Calzado, V. S., Trees, C., Stamnes, S., Fournier, G., McKee, D. & Stamnes, K., 27 Jul 2015, In : Optics Express. 23, 15, p. A987-A1009 23 p.

Research output: Contribution to journalArticle

Open Access
File
optical properties
dissolved organic matter
profiles
backscattering
absorptivity
2014
33 Citations (Scopus)

Evaluation of scatter corrections for ac-9 absorption measurements in coastal waters

Röttgers, R., McKee, D. & Woźniak, S. B., 2014, In : Methods in Oceanography. 19 p.

Research output: Contribution to journalArticle

coastal water
wavelengths
Wavelength
Scattering
Water
14 Citations (Scopus)

Optically significant particle sizes in seawater

Davies, E., McKee, D., Bowers, D. G., Graham, G. W. & Nimmo-Smith, W. A. M., 20 Feb 2014, In : Applied Optics. 53, 6, p. 1067-1074 8 p.

Research output: Contribution to journalArticle

particle size distribution
oceans
optical properties
predictions
Mie scattering
36 Citations (Scopus)

Temperature and salinity correction coefficients for light absorption by water in the visible to infrared spectral region

Röttgers, R., McKee, D. & Utschig, C., 20 Oct 2014, In : Optics Express. 22, 21, p. 25093-25108 16 p.

Research output: Contribution to journalArticle

Open Access
File
salinity
electromagnetic absorption
absorptivity
coefficients
wavelengths

Vertical migration maintains phytoplankton position in a tidal channel with residual flow

MacDonald, R. G., Bowers, D. G., McKee, D., Graham, G. W. & Nimmo-Smith, W. A. M., 27 Aug 2014, In : Marine Ecology Progress Series . 509, p. 113-126 14 p.

Research output: Contribution to journalArticle

Open Access
File
residual flow
tidal channel
vertical migration
phytoplankton
tides
2013
23 Citations (Scopus)

Evaluation and improvement of an iterative scattering correction scheme for in situ absorption and attenuation measurements

McKee, D., Piskozub, J., Röttgers, R. & Reynolds, R. A., Jul 2013, In : Journal of Atmospheric and Oceanic Technology. 30, 7, p. 1527–1541 15 p.

Research output: Contribution to journalArticle

Open Access
File
attenuation
scattering
Scattering
evaluation
transmissometers
5 Citations (Scopus)

Mueller matrix holographic method for small particle characterization: theory and numerical studies

Gao, M., Yang, P., McKee, D. & Kattawar, G. W., 20 Jul 2013, In : Applied Optics. 52, 21, p. 5289-5296 8 p.

Research output: Contribution to journalArticle

Holography
matrices
holography
formalism
interference
4 Citations (Scopus)

On the formation of tide-produced seiches and double high waters in coastal seas

Bowers, D. G., Macdonald, R. G., McKee, D., Nimmo-Smith, W. A. M. & Graham, G. W., 1 Dec 2013, In : Estuarine, Coastal and Shelf Science. 143, p. 108–116 9 p.

Research output: Contribution to journalArticle

seiche
coastal water
tides
tide
strait
10 Citations (Scopus)
coastal water
optical properties
solar radiation
Solar radiation
optical property
2012
5 Citations (Scopus)

Cochleates derived from Vibrio cholerae O1 proteoliposomes: The impact of structure transformation on mucosal immunisation

Acevedo, R., Perez, O., Zayas, C., Perez, J. L., Callico, A., Cedre, B., Garcia, L., McKee, D., Mullen, A. & Ferro, V., 12 Oct 2012, In : PLOS One. 7, 10, 8 p., e46461.

Research output: Contribution to journalArticle

Open Access
File
Vibrio cholerae O1
Immunization
adjuvants
immunization
Electron microscopy
110 Citations (Scopus)

In situ variability of mass-specific beam attenuation and backscattering of marine particles with respect to particle size, density, and composition

Neukermans, G., Loisel, H., Meriaux, X., Astoreca, R. & McKee, D., Jan 2012, In : Limnology and Oceanography . 57, 1, p. 124-144 21 p.

Research output: Contribution to journalArticle

particle size
backscattering
attenuation
particulates
optical properties
6 Citations (Scopus)

Remote sensing of seasonal stratification dynamics in the southern Irish Sea

Neil, C., Cunningham, A., McKee, D. & Polton, J. A., Dec 2012, In : Remote Sensing of Environment. 127, p. 288-297 10 p.

Research output: Contribution to journalArticle

Irish Sea
reflectance
remote sensing
Remote sensing
stratification
2011
28 Citations (Scopus)

Effective scattering phase functions for the multiple scattering regime

Piskozub, J. & McKee, D., 28 Feb 2011, In : Optics Express. 19, 5, p. 4786-4794 9 p.

Research output: Contribution to journalArticle

scattering
angular distribution
photons
albedo
medicine
23 Citations (Scopus)

Relationships between suspended mineral concentrations and red-waveband reflectances in moderately turbid shelf seas

Neil, C., Cunningham, A. & McKee, D., 15 Dec 2011, In : Remote Sensing of Environment. 115, 12, p. 3719-3730 12 p.

Research output: Contribution to journalArticle

shelf sea
reflectance
mineral content
dissolved organic matter
Minerals
2009
48 Citations (Scopus)

Role of measurement uncertainties in observed variability in the spectral backscattering ratio: a case study in mineral-rich coastal waters

McKee, D., Chami, M., Brown, I. C., Calzado, V. S., Doxaran, D. & Cunningham, A., 20 Aug 2009, In : Applied Optics. 48, 24, p. 4663-4675 13 p.

Research output: Contribution to journalArticle

coastal water
backscattering
minerals
particulates
regression analysis
60 Citations (Scopus)

Spectral variations of light scattering by marine particles in coastal waters, from the visible to the near infrared

Doxaran, D., Ruddick, K., McKee, D., Gentili, B., Tailliez, D., Chami, M. & Babin, M., Jul 2009, In : Limnology and Oceanography . 54, 4, p. 1257-1271 15 p.

Research output: Contribution to journalArticle

light scattering
coastal water
near infrared
particulates
power law
2008

Measuring algal fluorescence from space in optically complex coastal waters

McKee, D. & Cunningham, A., Nov 2008, In : Sea Technology. 49, 11, p. 41-44 3 p.

Research output: Contribution to journalArticle

Chlorophyll
Fluorescence
Sun
Water
Radiative transfer
32 Citations (Scopus)

Scattering error corrections for in situ absorption and attenuation measurements

McKee, D., Piskozub, J. & Brown, I. C., 24 Nov 2008, In : Optics Express. 16, 24, p. 19480-19492 13 p.

Research output: Contribution to journalArticle

Open Access
File
attenuation
scattering
coastal water
alternating current
step functions
2007
25 Citations (Scopus)
Open Access
File
Brewster angle
polarization
water
aerosols
oceans
32 Citations (Scopus)
remote sensing
chlorophyll
water
radiance
Irish Sea
47 Citations (Scopus)

Potential impacts of nonalgal materials on water-leaving sun induced chlorophyll fluorescence signals in coastal waters

McKee, D., Cunningham, A., Wright, D. & Hay, L., 2007, In : Applied Optics. 46, 31, p. 7720-7729 10 p.

Research output: Contribution to journalArticle

coastal water
chlorophylls
sun
fluorescence
organic materials
2006
59 Citations (Scopus)
Irish Sea
optical properties
optical property
seawater
minerals
29 Citations (Scopus)

Influence of the angular shape of the volume-scattering function and multiple scattering on remote sensing reflectance

McKee, D. J. C., Chami, M., Leymarie, E. & Khomenko, G., 20 Dec 2006, In : Applied Optics. 45, 36, p. 9210-9220 10 p.

Research output: Contribution to journalArticle

scattering functions
remote sensing
reflectance
radiance
scattering
2005
30 Citations (Scopus)

Evidence for wavelength dependence of the scattering phase function and its implication for modeling radiance transfer in shelf seas

McKee, D. & Cunningham, A., 1 Jan 2005, In : Applied Optics. 44, 1, p. 126-135 9 p.

Research output: Contribution to journalArticle

radiance
shelves
backscattering
stations
scattering
2004
9 Citations (Scopus)

Measurement and modelling of light scattering by phytoplankton cells at narrow forward angles

MacCallum, I., Cunningham, A. & McKee, D., 11 Jun 2004, In : Journal of Optics A: Pure and Applied Optics. 6, p. 698-702 4 p.

Research output: Contribution to journalArticle

phytoplankton
light scattering
Dunaliella
cells
scattering
2003
7 Citations (Scopus)

Estimation of absorption and backscattering coefficients from in situ radiometric measurements: theory and validation in case 2 waters

McKee, D. J. C., Cunningham, A. & Craig, S. E., 2003, In : Applied Optics. 42, 15, p. 2804-2810 7 p.

Research output: Contribution to journalArticle

radiance
backscattering
absorptivity
coefficients
irradiance
20 Citations (Scopus)

Fine-scale variability in phytoplankton community structure and inherent optical properties measured from an Autonomous Underwater Vehicle

Cunningham, A., McKee, D., Craig, S. E., Tarran, G. & Widdicombe, C., Sep 2003, In : Journal of Marine Systems. 43, 1-2, p. 51-59 8 p.

Research output: Contribution to journalArticle

autonomous underwater vehicle
optical properties
submersible
flagellate
optical property
20 Citations (Scopus)

Inherent and apparent optical properties in coastal waters: a study of the Clyde Sea in early summer

McKee, D., Cunningham, A., Slater, J., Jones, K. J. & Griffiths, C. R., Feb 2003, In : Estuarine, Coastal and Shelf Science. 56, 2, p. 369-376 7 p.

Research output: Contribution to journalArticle

optical properties
absorption coefficient
radiance
optical property
coastal water
14 Citations (Scopus)

Semi-empirical correction algorithm for AC-9 measurements in a coccolithophore bloom

McKee, D. J. C., Cunningham, A. & Craig, S. E., 20 Jul 2003, In : Applied Optics. 42, 21, p. 4369-4374 5 p.

Research output: Contribution to journalArticle

radiance
alternating current
scattering
English Channel
stations
2002
4 Citations (Scopus)

Assessment of a microscopic photobleaching technique for measuring the spectral absorption efficiency of individual phytoplankton cells

Neumüller, M., Cunningham, A. & McKee, D. J. C., 2002, In : Journal of Plankton Research. 24, 8, p. 741-746 5 p.

Research output: Contribution to journalArticle

photobleaching
absorption efficiency
phytoplankton
pigment
visible spectrum
11 Citations (Scopus)

Brewster-angle measurements of sea-surface reflectance using a high resolution spectroradiometer

Cunningham, A., Woods, P. & McKee, D., 8 Jul 2002, In : Journal of Optics A: Pure and Applied Optics. 4, 4, p. S29-S33 5 p.

Research output: Contribution to journalArticle

Open Access
File
spectroradiometers
Brewster angle
reflectance
high resolution
chlorophylls

Optical and hydrographic consequences of freshwater runoff during spring phytoplankton growth in a Scottish fjord

McKee, D., Cunningham, A. & Jones, K., 2002, In : Journal of Plankton Research. 24, 11, p. 1163-1171 8 p.

Research output: Contribution to journalArticle

fjord
runoff
phytoplankton
dissolved organic matter
surface layer
20 Citations (Scopus)

Optical and hydrographic consequences of freshwater run-off during spring phytoplankton growth in a Scottish fjord

Mckee, D., Cunningham, A. & Jones, K. J., 1 Nov 2002, In : Journal of Plankton Research. 24, 11, p. 1163-1171 9 p.

Research output: Contribution to journalArticle

progeny
fjord
phytoplankton
dissolved organic matter
runoff