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Research Output 1995 2019

2019

Remote sensing of zooplankton swarms

Basedow, S. L., McKee, D., Lefering, I., Gislason, A., Daase, M., Trudnowska, E., Egeland, E. S., Choquet, M. & Falk-Petersen, S., 24 Jan 2019, In : Scientific Reports. 9, 1, 10 p., 686.

Research output: Contribution to journalArticle

Open Access
File
zooplankton
remote sensing
ocean color
temporal distribution
carbon sequestration
2018
1 Citation (Scopus)

Estimation of suspended matter, organic carbon and chlorophyll-A concentrations estimation from particle size and refractive index distributions

Agagliate, J., Röttgers, R., Heymann, K. & McKee, D., 19 Dec 2018, In : Applied Sciences. 8, 12, 19 p., 2676.

Research output: Contribution to journalArticle

Open Access
File
Chlorophyll a
chlorophylls
Chlorophyll
Organic carbon
Particle Size
5 Citations (Scopus)

Evaluation of a flow cytometry method to determine size and real refractive index distributions in natural marine particle populations

Agagliate, J., Röttgers, R., Twardowski, M. S. & McKee, D., 1 Mar 2018, In : Applied Optics. 57, 7, p. 1705-1716 12 p.

Research output: Contribution to journalArticle

Open Access
File
cytometry
Flow cytometry
Particle size analysis
Refractive index
particle size distribution
1 Citation (Scopus)

Forward modeling of inherent optical properties from flow cytometry estimates of particle size and refractive index

Agagliate, J., Lefering, I. & McKee, D., 10 Mar 2018, In : Applied Optics. 57, 8, p. 1777-1788 12 p.

Research output: Contribution to journalArticle

Open Access
File
cytometry
refractivity
particle size distribution
optical properties
root-mean-square errors
1 Citation (Scopus)

Inversion of in situ light absorption and attenuation measurements to estimate constituent concentrations in optically complex shelf seas

Ramírez-Pérez, M., Twardowski, M., Trees, C., Piera, J. & McKee, D., 31 Jan 2018, In : Journal of Geophysical Research: Oceans. 123, 1, p. 720-737 18 p.

Research output: Contribution to journalArticle

Open Access
File
shelf sea
electromagnetic absorption
shelves
Light absorption
Optical properties

Measurement uncertainties in PSICAM and reflective tube absorption meters

Lefering, I., Röttgers, R., Utschig, C., Twardowski, M. S. & McKee, D., 17 Sep 2018, In : Optics Express. 26, 19, p. 24384-24402 19 p.

Research output: Contribution to journalArticle

Open Access
File
point sources
alternating current
tubes
cavities
coastal water

The use of a quadcopter-mounted hyper-spectral spectrometer for examining reflectance in Scottish coastal waters

Weeks, R. J., Anderson, P., Davidson, K. & McKee, D., 31 Oct 2018, 2018 IEEE International Geoscience and Remote Sensing Symposium, IGARSS 2018 - Proceedings. Piscataway, N.J.: Institute of Electrical and Electronics Engineers Inc., p. 8826-8829 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution book

Open Access
File
Spectrometers
coastal water
reflectance
algal bloom
spectrometer
2017
11 Citations (Scopus)

Assessing uncertainties in scattering correction algorithms for reflective tube absorption measurements made with a WET Labs ac-9

Stockley, N. D., Röttgers, R., McKee, D., Lefering, I., Sullivan, J. M. & Twardowski, M. S., 10 Nov 2017, In : Optics Express. 25, 24, p. A1139-A1153 15 p.

Research output: Contribution to journalArticle

Open Access
File
scattering functions
tubes
scattering
subtraction
water
4 Citations (Scopus)

Determination of the absorption coefficient of chromophoric dissolved organic matter from underway spectrophotometry

Dall'Olmo, G., Brewin, R. J. W., Nencioli, F., Organelli, E., Lefering, I., McKee, D., Röttgers, R., Mitchell, C., Boss, E., Bricaud, A. & Tilstone, G., 31 Oct 2017, In : Optics Express. 25, 24, p. A1079-A1095 17 p.

Research output: Contribution to journalArticle

Open Access
File
dissolved organic matter
spectrophotometry
absorptivity
oceans
color
3 Citations (Scopus)

Large scale three-dimensional modelling for wave and tidal energy resource and environmental impact: methodologies for quantifying acceptable thresholds for sustainable exploitation

Gallego, A., Side, J., Baston, S., Waldman, S., Bell, M., James, M., Davies, I., O'Hara Murray, R., Heath, M., Sabatino, A., McKee, D., McCaig, C., Karunarathna, H., Fairley, I., Chatzirodou, A., Venugopal, V., Nemalidinne, R., Yung, T. Z., Vögler, A., MacIver, R. & 1 othersBurrows, M., 1 Oct 2017, In : Ocean and Coastal Management. 147, p. 67-77 11 p.

Research output: Contribution to journalArticle

Open Access
File
energy resources
three-dimensional modeling
Environmental impact assessments
Energy resources
energy resource
7 Citations (Scopus)

The area-to-mass ratio and fractal dimension of marine flocs

Bowers, D. G., McKee, D., Jago, C. F. & Nimmo-Smith, W. A. M., 5 Apr 2017, In : Estuarine, Coastal and Shelf Science. 189, p. 224-234 11 p.

Research output: Contribution to journalArticle

Open Access
File
fractal dimensions
optical equipment
optical instrument
flocculation
reflectance
7 Citations (Scopus)

Uncertainty budgets for liquid waveguide CDOM absorption measurements

Lefering, I., Röttgers, R., Utschig, C. & McKee, D., 1 Aug 2017, In : Applied Optics. 56, 22, p. 6357-6366 10 p.

Research output: Contribution to journalArticle

Open Access
File
dissolved organic matter
budgets
Biological materials
Waveguides
waveguides
2016
2 Citations (Scopus)

A bio-optical model for integration into ecosystem models for the Ligurian Sea

Bengil, F., McKee, D., Beşiktepe, S. T., Sanjuan Calzado, V. & Trees, C., 31 Dec 2016, In : Progress in Oceanography. 149, p. 1-15 15 p.

Research output: Contribution to journalArticle

Open Access
File
ecosystems
ecosystem
radiative transfer
coastal water
prediction
20 Citations (Scopus)

A compilation of global bio-optical in situ data for ocean-colour satellite applications

Valente, A., Sathyendranath, S., Brotas, V., Groom, S., Grant, M., Taberner, M., Antoine, D., Arnone, R., Balch, W. M., Barker, K., Barlow, R., Belanger, S., Berthon, J. F., Besiktepe, S., Brando, V., Canuti, E., Chavez, F., Claustre, H., Crout, R., Frouin, R. & 23 othersGarcia-Soto, C., Gibb, S. W., Gould, R., Hooker, S., Kahru, M., Klein, H., Kratzer, S., Loisel, H., McKee, D., Mitchell, B. G., Moisan, T., Muller-Karger, F., O'Dowd, L., Ondrusek, M., Poulton, A. J., Repecaud, M., Smyth, T., Sosik, H. M., Twardowski, M., Voss, K., Werdell, J., Wernand, M. & Zibordi, G., 3 Jun 2016, In : Earth System Science Data. 8, 1, p. 235-252 18 p.

Research output: Contribution to journalArticle

Open Access
File
ocean color
metadata
quality control
in situ
optical property
Open Access
File
Cameras
Printed circuit boards
Costs
Hyperspectral imaging
4 Citations (Scopus)
Open Access
File
ocean color
optical properties
irradiance
optical property
Minerals
4 Citations (Scopus)

Improved determination of particulate absorption from combined filter pad and PSICAM measurements

Lefering, I., Röttgers, R., Weeks, R., Connor, D., Utschig, C., Heymann, K. & McKee, D., 17 Oct 2016, In : Optics Express. 24, 22, p. 24805-24823 19 p.

Research output: Contribution to journalArticle

Open Access
File
particulates
point sources
filters
cavities
regression analysis
9 Citations (Scopus)

Optical closure in marine waters from in situ inherent optical property measurements

Lefering, K., Bengil, F., Trees, C., Röttgers, R., Bowers, D., Nimmo-Smith, A., Schwarz, J. & McKee, D., 27 Jun 2016, In : Optics Express. 24, 13, p. 14036-14052 17 p.

Research output: Contribution to journalArticle

Open Access
File
closures
optical properties
water
stations
coastal water
2015
15 Citations (Scopus)

Impact of measurement uncertainties on determination of chlorophyll-specific absorption coefficient for marine phytoplankton

McKee, D., Röttgers, R., Neukermans, G., Calzado, V. S., Trees, C., Ampolo-Rella, M., Neil, C. & Cunningham, A., 2015, In : Journal of Geophysical Research: Oceans. 13 p.

Research output: Contribution to journalArticle

Open Access
File
phytoplankton
Phytoplankton
absorption coefficient
chlorophylls
Chlorophyll
4 Citations (Scopus)

Inferring inherent optical properties and water constituent profiles from apparent optical properties

Fan, Y., Li, W., Calzado, V. S., Trees, C., Stamnes, S., Fournier, G., McKee, D. & Stamnes, K., 27 Jul 2015, In : Optics Express. 23, 15, p. A987-A1009 23 p.

Research output: Contribution to journalArticle

Open Access
File
optical properties
dissolved organic matter
profiles
backscattering
absorptivity

Segmentation of multispectral images and prediction of ChI-a concentration for effective ocean colour remote sensing

Ren, J., Zeng, X. & McKee, D., 3 Apr 2015, (Accepted/In press) 2015 IEEE International Geoscience and Remote Sensing Symposium (IGARSS). Piscataway, NJ.: IEEE, p. 2303-2306 4 p. 7326268

Research output: Chapter in Book/Report/Conference proceedingConference contribution book

Open Access
File
Remote sensing
Color
Chlorophyll
Pixels
Sensors

Use of ocean colour remote sensing to monitor sea surface suspended sediments

Sabatino, A. D., Clement, R., Heath, M. R. & McKee, D., 30 Sep 2015, TeraWatt Position Papers: A 'toolbox' of methods to better understand and assess the effects of tidal and wave energy arrays on the marine environment. Side, J. (ed.). St Andrews, p. 129-140 12 p. 6

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access
File
Suspended sediments
ocean color
suspended sediment
Remote sensing
sea surface
2014
34 Citations (Scopus)

Evaluation of scatter corrections for ac-9 absorption measurements in coastal waters

Röttgers, R., McKee, D. & Woźniak, S. B., 2014, In : Methods in Oceanography. 19 p.

Research output: Contribution to journalArticle

coastal water
wavelengths
Wavelength
Scattering
Water
14 Citations (Scopus)

Optically significant particle sizes in seawater

Davies, E., McKee, D., Bowers, D. G., Graham, G. W. & Nimmo-Smith, W. A. M., 20 Feb 2014, In : Applied Optics. 53, 6, p. 1067-1074 8 p.

Research output: Contribution to journalArticle

particle size distribution
oceans
optical properties
predictions
Mie scattering
36 Citations (Scopus)

Temperature and salinity correction coefficients for light absorption by water in the visible to infrared spectral region

Röttgers, R., McKee, D. & Utschig, C., 20 Oct 2014, In : Optics Express. 22, 21, p. 25093-25108 16 p.

Research output: Contribution to journalArticle

Open Access
File
salinity
electromagnetic absorption
absorptivity
coefficients
wavelengths

Vertical migration maintains phytoplankton position in a tidal channel with residual flow

MacDonald, R. G., Bowers, D. G., McKee, D., Graham, G. W. & Nimmo-Smith, W. A. M., 27 Aug 2014, In : Marine Ecology Progress Series . 509, p. 113-126 14 p.

Research output: Contribution to journalArticle

Open Access
File
residual flow
tidal channel
vertical migration
phytoplankton
tides
2013
23 Citations (Scopus)

Evaluation and improvement of an iterative scattering correction scheme for in situ absorption and attenuation measurements

McKee, D., Piskozub, J., Röttgers, R. & Reynolds, R. A., Jul 2013, In : Journal of Atmospheric and Oceanic Technology. 30, 7, p. 1527–1541 15 p.

Research output: Contribution to journalArticle

Open Access
File
attenuation
scattering
Scattering
evaluation
transmissometers
1 Citation (Scopus)

Measurement of hyperspectral underwater light fields

Cunningham, A. & Mckee, D., 1 Dec 2013, Subsea Optics and Imaging. Watson, J. E. & Zielinski, O. (eds.). p. 83-97 15 p. (Woodhead Publishing Series in Electronic and Optical Materials).

Research output: Chapter in Book/Report/Conference proceedingChapter

Oceanography
Chlorophyll
Imaging systems
Raman scattering
Water
5 Citations (Scopus)

Mueller matrix holographic method for small particle characterization: theory and numerical studies

Gao, M., Yang, P., McKee, D. & Kattawar, G. W., 20 Jul 2013, In : Applied Optics. 52, 21, p. 5289-5296 8 p.

Research output: Contribution to journalArticle

Holography
matrices
holography
formalism
interference
4 Citations (Scopus)

On the formation of tide-produced seiches and double high waters in coastal seas

Bowers, D. G., Macdonald, R. G., McKee, D., Nimmo-Smith, W. A. M. & Graham, G. W., 1 Dec 2013, In : Estuarine, Coastal and Shelf Science. 143, p. 108–116 9 p.

Research output: Contribution to journalArticle

seiche
coastal water
tides
tide
strait
10 Citations (Scopus)
coastal water
optical properties
solar radiation
Solar radiation
optical property
2012

Charybdis: The next generation in ocean colour and biogeochemical remote sensing

Lowe, C. J., Macdonald, M., Greenland, S. & McKee, D., 13 Aug 2012, p. Article Number SSC12-IV-7. 13 p.

Research output: Contribution to conferencePaper

File
Oceans and Seas
Remote sensing
Color
Biogeochemistry
Nanosatellites
5 Citations (Scopus)

Cochleates derived from Vibrio cholerae O1 proteoliposomes: The impact of structure transformation on mucosal immunisation

Acevedo, R., Perez, O., Zayas, C., Perez, J. L., Callico, A., Cedre, B., Garcia, L., McKee, D., Mullen, A. & Ferro, V., 12 Oct 2012, In : PLOS One. 7, 10, 8 p., e46461.

Research output: Contribution to journalArticle

Open Access
File
Vibrio cholerae O1
Immunization
adjuvants
immunization
Electron microscopy
111 Citations (Scopus)

In situ variability of mass-specific beam attenuation and backscattering of marine particles with respect to particle size, density, and composition

Neukermans, G., Loisel, H., Meriaux, X., Astoreca, R. & McKee, D., Jan 2012, In : Limnology and Oceanography . 57, 1, p. 124-144 21 p.

Research output: Contribution to journalArticle

particle size
backscattering
attenuation
particulates
optical properties

Pixel clustering and hyperspectral image segmentation for ocean colour remote sensing

Zeng, X., Ren, J., McKee, D., Lavender, S. & Marshall, S., 15 May 2012, p. 86-91. 6 p.

Research output: Contribution to conferencePaper

ocean color
segmentation
pixel
remote sensing
seed
6 Citations (Scopus)

Remote sensing of seasonal stratification dynamics in the southern Irish Sea

Neil, C., Cunningham, A., McKee, D. & Polton, J. A., Dec 2012, In : Remote Sensing of Environment. 127, p. 288-297 10 p.

Research output: Contribution to journalArticle

Irish Sea
reflectance
remote sensing
Remote sensing
stratification

Tidal synchronous orbit: A novel approach to remote sensing of oceanic regions

Lowe, C., Macdonald, M., Greenland, S. C. & McKee, D., 1 Oct 2012, p. IAC-12-B1.2.17 p13924.

Research output: Contribution to conferencePoster

Open Access
File
Remote sensing
Orbits
Sun
Earth (planet)
Synchronization
2011
29 Citations (Scopus)

Effective scattering phase functions for the multiple scattering regime

Piskozub, J. & McKee, D., 28 Feb 2011, In : Optics Express. 19, 5, p. 4786-4794 9 p.

Research output: Contribution to journalArticle

scattering
angular distribution
photons
albedo
medicine
23 Citations (Scopus)

Relationships between suspended mineral concentrations and red-waveband reflectances in moderately turbid shelf seas

Neil, C., Cunningham, A. & McKee, D., 15 Dec 2011, In : Remote Sensing of Environment. 115, 12, p. 3719-3730 12 p.

Research output: Contribution to journalArticle

shelf sea
reflectance
mineral content
dissolved organic matter
Minerals
2009
48 Citations (Scopus)

Role of measurement uncertainties in observed variability in the spectral backscattering ratio: a case study in mineral-rich coastal waters

McKee, D., Chami, M., Brown, I. C., Calzado, V. S., Doxaran, D. & Cunningham, A., 20 Aug 2009, In : Applied Optics. 48, 24, p. 4663-4675 13 p.

Research output: Contribution to journalArticle

coastal water
backscattering
minerals
particulates
regression analysis
60 Citations (Scopus)

Spectral variations of light scattering by marine particles in coastal waters, from the visible to the near infrared

Doxaran, D., Ruddick, K., McKee, D., Gentili, B., Tailliez, D., Chami, M. & Babin, M., Jul 2009, In : Limnology and Oceanography . 54, 4, p. 1257-1271 15 p.

Research output: Contribution to journalArticle

light scattering
coastal water
near infrared
particulates
power law
2008

Measuring algal fluorescence from space in optically complex coastal waters

McKee, D. & Cunningham, A., Nov 2008, In : Sea Technology. 49, 11, p. 41-44 3 p.

Research output: Contribution to journalArticle

Chlorophyll
Fluorescence
Sun
Water
Radiative transfer
32 Citations (Scopus)

Scattering error corrections for in situ absorption and attenuation measurements

McKee, D., Piskozub, J. & Brown, I. C., 24 Nov 2008, In : Optics Express. 16, 24, p. 19480-19492 13 p.

Research output: Contribution to journalArticle

Open Access
File
attenuation
scattering
coastal water
alternating current
step functions
2007
2 Citations (Scopus)

An approach to determining shelf seawater composition by inversion of in situ inherent optical property measurements

Brown, IC., Cunningham, A. & McKee, D., 18 Jun 2007, p. 1-6. 5 p.

Research output: Contribution to conferencePaper

optical property
seawater
radiance
towed body
remote sensing
25 Citations (Scopus)
Open Access
File
Brewster angle
polarization
water
aerosols
oceans

Determining the impact of non-algal materials on water-leaving solar stimulated fluorescence signals in coastal waters

McKee, D., Cunningham, A., Wright, D. & Hay, L., 2007, New York: IEEE. 6 p. (Oceans 2007 Europe International Conference)

Research output: Book/ReportBook

coastal water
fluorescence
water
optical property
physiology
33 Citations (Scopus)
remote sensing
chlorophyll
water
radiance
Irish Sea
48 Citations (Scopus)

Potential impacts of nonalgal materials on water-leaving sun induced chlorophyll fluorescence signals in coastal waters

McKee, D., Cunningham, A., Wright, D. & Hay, L., 2007, In : Applied Optics. 46, 31, p. 7720-7729 10 p.

Research output: Contribution to journalArticle

coastal water
chlorophylls
sun
fluorescence
organic materials

The influence of dissolved and particulate materials on underwater light fields in shelf seas: implications for primary production modelling

Ramage, L., Cunningham, A. & McKee, D. J. C., 2007, OCEANS 2007 - EUROPE. New York: IEEE, Vol. VOLS 1-3. p. 275-280 5 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

shelf sea
primary production
modeling
radiance
irradiance
2006
59 Citations (Scopus)
Irish Sea
optical properties
optical property
seawater
minerals