Projects per year
Personal profile
Personal Statement
Ben Pickard obtained a BSc in Biochemistry from Imperial College London (1992), and a PhD from the University of Edinburgh (1996). Before coming to the University of Strathclyde, he worked at the Babraham Institute, Cambridge on factors regulating DNA methylation, and at the Molecular Medicine Centre, Edinburgh, identifying genetic risk factors for common psychiatric illnesses such as schizophrenia, bipolar disorder and major depression.
Teaching Interests
- Teaching across Biomedical Sciences classes: BM110, 108, 109, 210, 214, 321, 326, 327, 422, 423, 430, 432; Pharmacy: MP422; Postgraduate: BM934, 937, 951, 942, 952, 953, 959.
- Coordinator of Biomedical Sciences classes BM321, BM423; Postgraduate: BM934, 937, 952.
- Personal Development Advisor
- Internal/external examiner PhD theses
- External examiner MSc Neuroscience, UCL, (2013-2015)
Certificates of Recognition in University of Strathclyde Student Union Teaching Excellence Awards: 2012, 2013, 2014. Winner: Most Supportive Teacher 2017.
Research Interests
The traditional view is that gene expression is largely governed by promoter activity, meaning that analysis is carried out gene-by-gene. Expressed mRNAs encode expressed proteins and, again, the prevailing view is that mRNA levels are the major influence on levels of their encoded proteins.
I have discovered an entirely new level of regulation for both mRNA and protein expression that is based on the idea that the synthesis of both types of molecules is dependent on an interaction between the supply of building blocks (nucleotides or amino acids) and the demands of the sequences of the mRNAs or proteins to be made (how extreme/costly a composition they possess). Independent studies of protein expression data, and now mRNA expression data, have shown that this interaction drives a global-level regulation of expression. This is like looking at the 'wood' instead of the 'trees', and offers a high-level readout of the cellular state.
For proteins, we have shown that growth/cell proliferation eats up the amino acid supply, particularly limiting the expression of proteins involved in connective tissue structure. For mRNA, the situation much more profound. I see global mRNA expression profiles shifted in numerous disease states such as Alzheimer's disease , schizophrenia, and autoimmune conditions. Additionally, 20% of all drugs/chemicals assessed perturb the global profile, revealing a new way to think of drug action and side-effect. It's not all pathological: the cell uses this form of regulation across the circadian day and menstrual cycle, and it apears to correlate with the extent of cellular differentiation. In fact, cells appear to use changes in nucleobase supply to shift their global expression profile as an efficent way to reprogram physiological state or to respond to adversity.
The goal of my research now is to convert these largely data-driven findings into practical applications relating to disease understanding and treatment.
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Education/Academic qualification
Doctor of Science, Gene expression in the hippocampus, University of Edinburgh
Award Date: 1 Jan 1996
Bachelor of Biomedical science, Imperial College of Science, Technology and Medicine
Award Date: 1 Jan 1992
Keywords
- schizophrenia
- bipolar disorder
- genetics
- cell biology
- metabolism
- stem cells
- molecular biology
- transcriptomics
- gene trap
- telomerase
- epigenetics
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Collaborations and top research areas from the last five years
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Regulation of Cancer-Associated Proteins by S-acylation
Chamberlain, L. (Principal Investigator), Pickard, B. (Co-investigator) & Teng Shervone, T. (Post Grad Student)
1/11/23 → 31/10/26
Project: Non-funded project
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REGULATION OF PANCREATIC BETA CELL PHYSIOLOGY BY THE S-ACYLATION ENZYME ZDHHC17
Chamberlain, L. (Principal Investigator), Pickard, B. (Co-investigator) & Allan Cockerill, J. (Post Grad Student)
1/10/23 → 30/09/26
Project: Research - Studentship
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The amino acid composition of a protein influences its expression
Thompson, R. & Pickard, B. S., 14 Oct 2024, In: PLoS ONE. 19, 10, 15 p., e0284234.Research output: Contribution to journal › Article › peer-review
Open AccessFile15 Downloads (Pure) -
Genes associated with amyloid-beta-induced inflammasome-mediated neuronal death identified using functional gene trap mutagenesis approach
Yap, J. K. Y., Pickard, B. S., Gan, S. Y. & Chan, E. W. L., 31 Jul 2021, In: International Journal of Biochemistry and Cell Biology. 136, 9 p., 106014.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Citation (Scopus)70 Downloads (Pure)
Datasets
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Supplementary Files 1& 2: Thompson & Pickard: The amino acid composition of a protein influences its expression
Pickard, B. (Creator) & Thompson, R. (Creator), University of Strathclyde, 2 Oct 2023
DOI: 10.15129/220e3e34-588b-4a94-93eb-8bd73cd2bf3e
Dataset